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CAZyme Gene Cluster: MGYG000001514_12|CGC18

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001514_02547
putative arabinose-binding protein
TC 1079864 1081195 + 3.A.1.1.34
MGYG000001514_02548
L-arabinose transport system permease protein AraP
TC 1081275 1082168 + 3.A.1.1.34
MGYG000001514_02549
L-arabinose transport system permease protein AraQ
TC 1082172 1083005 + 3.A.1.1.34
MGYG000001514_02550
hypothetical protein
STP 1083529 1084917 + SBP_bac_1
MGYG000001514_02551
Lactose transport system permease protein LacF
TC 1085038 1085925 + 3.A.1.1.20
MGYG000001514_02552
hypothetical protein
TC 1085947 1086795 + 3.A.1.1.36
MGYG000001514_02553
Extracellular endo-alpha-(1->5)-L-arabinanase
CAZyme 1086855 1088258 + GH43_4| GH43
MGYG000001514_02554
Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
CAZyme 1088303 1089271 + CBM42| GH43| GH43_26
MGYG000001514_02555
Intracellular exo-alpha-L-arabinofuranosidase 2
CAZyme 1089349 1090836 + GH51
MGYG000001514_02556
hypothetical protein
CAZyme 1090933 1095576 + GH43_4| GH43| CBM13| CBM54
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is arabinan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001514_02553 GH43_e123|3.2.1.99 arabinan
MGYG000001514_02554 GH43_e158|CBM42_e13|3.2.1.- xylan
MGYG000001514_02555 GH51_e14|3.2.1.55 arabinan
MGYG000001514_02556 GH43_e54|CBM13_e83|3.2.1.99 arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig


Genomic location